PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.2G027900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 211aa    MW: 22040.6 Da    PI: 6.8556
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.2G027900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-1085132148
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         e++l+r +rk++NRe+ArrsR+R++++ e Le+ ++eL a+++aL+ +
  Sevir.2G027900.1.p  85 EERLRRLKRKISNRESARRSRARRRQQAEDLERAAEELRAQRRALAAR 132
                         789*****************************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-881132No hitNo description
SMARTSM003381.5E-585149IPR004827Basic-leucine zipper domain
PfamPF001708.7E-785132IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9187132IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.73E-689134No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MSLDEAMLLD LDFAGAPPGM DVAYGFGFDF DFDFDTAAAS GASGGFDFDT TECGAAAGTG  60
SGTTSPPVDA STKAGSSGID DDDDEERLRR LKRKISNRES ARRSRARRRQ QAEDLERAAE  120
ELRAQRRALA ARRDAAAARA LAVRLDNARL GAEAGALRRR LREAQRQAVL LLALARAQMA  180
PSAVGIGGGR ALQVVPPQPA GGSATGMMTS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459298.18e-13hypothetical protein SORBIDRAFT_02g001970
TrEMBLK4A0N91e-141K4A0N9_SETIT; Uncharacterized protein
STRINGSi032429m1e-141(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3211444